Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP40_02261 | Not Available | Negative | 653806 - 654345 | 19664.4 |
| polysaccharide deacetylase | ALP40_02262 | Not Available | Negative | 654342 - 655268 | 35619.3 |
| 5-hydroxyisourate hydrolase | ALP40_02263 | Not Available | Positive | 655654 - 656007 | 12824.2 |
| transcriptional regulator gntr | ALP40_02264 | Not Available | Positive | 656163 - 656921 | 27864.4 |
| major facilitator superfamily transporter | ALP40_02265 | Not Available | Negative | 656929 - 658155 | 42335.0 |
| hypothetical protein | ALP40_02266 | Not Available | Negative | 658308 - 658541 | 8265.92 |
| hypothetical protein | ALP40_100472 | Not Available | Negative | 658572 - 658835 | 9424.29 |
| aromatic amino acid aminotransferase | ALP40_02267 | Not Available | Negative | 659104 - 660300 | 43326.6 |
| putative pterin-4-alpha-carbinolamine dehydratase | ALP40_02268 | Not Available | Negative | 660300 - 660656 | 13261.8 |
| phenylalanine 4-monooxygenase | ALP40_02269 | Not Available | Negative | 660689 - 661537 | 32240.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
