Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP40_02212 | Not Available | Negative | 593791 - 594486 | 25438.6 |
| hypothetical protein | ALP40_02213 | Not Available | Negative | 594752 - 595423 | 24926.9 |
| glutathione s-transferase | ALP40_02214 | Not Available | Negative | 595690 - 596388 | 25955.4 |
| chromate transporter, chromate ion transporter family | ALP40_02215 | Not Available | Negative | 597108 - 598466 | 48662.4 |
| gntr family transcriptional regulator | ALP40_02216 | Not Available | Negative | 598517 - 599185 | 24749.9 |
| membrane protein | ALP40_02217 | Not Available | Positive | 599440 - 600672 | 42974.9 |
| hypothetical protein | ALP40_02218 | Not Available | Positive | 600691 - 601461 | 26797.9 |
| hypothetical protein | ALP40_02219 | Not Available | Positive | 601458 - 602252 | 28682.4 |
| allophanate hydrolase/urea amidolyase-like protein | ALP40_02220 | Not Available | Positive | 602262 - 603863 | 56595.2 |
| carbamoyl-phosphate synthase subunit l | ALP40_02221 | Not Available | Positive | 603860 - 605596 | 61993.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
