Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid adenylation protein | ALP40_02202 | Not Available | Positive | 564527 - 574366 | 361624.0 |
| amino acid adenylation protein | ALP40_02203 | Not Available | Positive | 574363 - 578478 | 151579.0 |
| non-ribosomal peptide synthetase/polyketide synthetase | ALP40_02204 | Not Available | Positive | 578475 - 587669 | 336015.0 |
| mbth-like protein | ALP40_02205 | Not Available | Positive | 587662 - 587850 | 6983.13 |
| taurine dioxygenase | ALP40_02206 | Not Available | Positive | 587906 - 588775 | 32108.3 |
| n-acetyltransferase gcn5 | ALP40_02207 | Not Available | Negative | 588971 - 589513 | 20361.4 |
| hypothetical protein | ALP40_02208 | Not Available | Positive | 589734 - 590699 | 34974.6 |
| short-chain dehydrogenase/reductase sdr | ALP40_02209 | Not Available | Negative | 590880 - 591701 | 29468.2 |
| short chain dehydrogenase/reductase family oxidoreductase | ALP40_02210 | Not Available | Negative | 592006 - 592776 | 27599.9 |
| hypothetical protein | ALP40_02211 | Not Available | Negative | 592883 - 593794 | 32396.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
