Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase, gnat family | ALP40_02183 | Not Available | Positive | 538713 - 539177 | 17101.6 |
| alcohol dehydrogenase zinc-binding domain protein | ALP40_02184 | Not Available | Negative | 539510 - 540442 | 33336.9 |
| zinc-containing alcohol dehydrogenase super protein | ALP40_02185 | Not Available | Negative | 540439 - 541611 | 41953.9 |
| l-sorbosone dehydrogenase | ALP40_02186 | Not Available | Negative | 541930 - 543222 | 46185.6 |
| hypothetical protein | ALP40_02187 | Not Available | Negative | 543219 - 543647 | 15373.2 |
| protein containing a zn-ribbon-like motif, rna-binding | ALP40_02188 | Not Available | Positive | 544277 - 544855 | 21430.7 |
| hypothetical protein | ALP40_02189 | Not Available | Negative | 544863 - 545234 | 13248.7 |
| aldo/keto reductase | ALP40_02190 | Not Available | Negative | 545301 - 546410 | 40948.6 |
| hypothetical protein | ALP40_100585 | Not Available | Negative | 546441 - 546557 | 4619.59 |
| deoxyribodipyrimidine photolyase-like protein | ALP40_02191 | Not Available | Negative | 546587 - 548125 | 58216.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
