Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP40_02173 | Not Available | Positive | 520811 - 526045 | 194591.0 |
| acyl-coa dehydrogenase | ALP40_02174 | Not Available | Negative | 526083 - 527234 | 41853.1 |
| enoly-coa hydratase/isomerase protein | ALP40_02175 | Not Available | Negative | 527238 - 528335 | 40478.8 |
| transporter | ALP40_02176 | Not Available | Positive | 528620 - 530299 | 60181.8 |
| hlyd family secretion protein | ALP40_04886 | Not Available | Positive | 530272 - 531495 | 44291.8 |
| phosphate transporter | ALP40_04887 | Not Available | Negative | 531826 - 533475 | 58145.5 |
| putative zink transporter | ALP40_02179 | Not Available | Negative | 533577 - 534596 | 38356.2 |
| aldo/keto reductase | ALP40_02180 | Not Available | Negative | 534694 - 535515 | 30489.7 |
| histidine kinase, hamp region: chemotaxis sensory transducer | ALP40_04888 | Not Available | Negative | 535597 - 537300 | 61857.1 |
| tetr family transcriptional regulator | ALP40_02182 | Not Available | Negative | 537611 - 538216 | 22555.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
