Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase protein | ALP40_01703 | Not Available | Negative | 424627 - 425277 | 24010.2 |
| cobyrinic acid a,c-diamide synthase | ALP40_01704 | Not Available | Negative | 425274 - 426569 | 46103.4 |
| cobalamin adenolsyltransferase/cobinamide atp-dependent adenolsyltransferase | ALP40_01705 | Not Available | Negative | 426595 - 427206 | 22524.2 |
| sorbosone dehydrogenase | ALP40_04787 | Not Available | Positive | 427558 - 429003 | 51498.1 |
| lipoprotein | ALP40_01707 | Not Available | Negative | 429119 - 429670 | 19424.6 |
| nlp/p60-like protein | ALP40_01708 | Not Available | Negative | 429759 - 430481 | 26158.3 |
| putative protein-dependent deacetylase | ALP40_01709 | Not Available | Negative | 430557 - 431321 | 27477.3 |
| dna replication initiation factor | ALP40_01710 | Not Available | Negative | 431315 - 432019 | 26664.4 |
| putative permease | ALP40_01711 | Not Available | Negative | 432237 - 433313 | 38691.3 |
| hypothetical protein | ALP40_01712 | Not Available | Negative | 433348 - 434427 | 38396.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
