Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| segregation and condensation protein b | ALP40_01613 | Not Available | Negative | 325116 - 325895 | 29546.9 |
| hypothetical protein | ALP40_01614 | Not Available | Negative | 325911 - 326729 | 30659.4 |
| sua5/ycio/yrdc/ywlc protein | ALP40_01615 | Not Available | Negative | 326729 - 327397 | 24300.5 |
| phosphoesterase php, n-terminal:php, c-terminal | ALP40_01616 | Not Available | Negative | 327372 - 328235 | 31059.0 |
| putative intracellular septation protein a | ALP40_01617 | Not Available | Positive | 328262 - 328897 | 23907.8 |
| hypothetical protein | ALP40_01618 | Not Available | Positive | 328899 - 329198 | 10447.5 |
| hypothetical protein | ALP40_01619 | Not Available | Positive | 329352 - 329759 | 14943.1 |
| dna-binding response regulator | ALP40_01620 | Not Available | Positive | 329767 - 330444 | 24985.1 |
| hypothetical protein | ALP40_01621 | Not Available | Positive | 330555 - 331031 | 18003.6 |
| sensor histidine kinase | ALP40_01622 | Not Available | Positive | 331122 - 332477 | 50542.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
