Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus bioproteinsis protein pilb | ALP40_04230 | Not Available | Positive | 243878 - 245578 | 62586.4 |
| type iv pilus bioproteinsis protein pilc | ALP40_04231 | Not Available | Positive | 245581 - 246798 | 43941.4 |
| type 4 prepilin-like protein leader peptide-processing enzyme | ALP40_04232 | Not Available | Positive | 246800 - 247672 | 31932.0 |
| dephospho-coa kinase | ALP40_04233 | Not Available | Positive | 247669 - 248292 | 23475.1 |
| dna gyrase inhibitor yacg | ALP40_04234 | Not Available | Positive | 248289 - 248498 | 7436.59 |
| hypothetical protein | ALP40_04235 | Not Available | Negative | 248737 - 249198 | 17364.3 |
| hypothetical protein | ALP40_04236 | Not Available | Positive | 249323 - 249952 | 24415.1 |
| hypothetical protein | ALP40_04237 | Not Available | Positive | 249949 - 250491 | 19943.1 |
| hypothetical protein | ALP40_04238 | Not Available | Positive | 250522 - 250689 | 6412.92 |
| fad-dependent pyridine nucleotide-disulfide oxidoreductase | ALP40_04239 | Not Available | Positive | 250753 - 252051 | 46493.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
