Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase | ALP40_04203 | Not Available | Negative | 212026 - 213600 | 59106.9 |
| pts system fructose-specific transporter subunits iibc | ALP40_04204 | Not Available | Negative | 213897 - 215639 | 59850.8 |
| phosphofructokinase | ALP40_04205 | Not Available | Negative | 215652 - 216593 | 32764.6 |
| phosphoenolpyruvate-protein phosphotransferase | ALP40_05400 | Not Available | Negative | 216593 - 219496 | 103335.0 |
| dna-binding transcriptional regulator frur | ALP40_04207 | Not Available | Positive | 219801 - 220796 | 36537.8 |
| tatd family hydrolase | ALP40_04208 | Not Available | Positive | 220799 - 221581 | 29453.2 |
| ampe protein | ALP40_04209 | Not Available | Negative | 221603 - 222499 | 32867.7 |
| n-acetyl-anhydromuranmyl-l-alanine amidase | ALP40_04210 | Not Available | Negative | 222515 - 223063 | 20189.5 |
| hypothetical protein | ALP40_05402 | Not Available | Negative | 223217 - 225484 | 84716.2 |
| nicotinate-nucleotide pyrophosphorylase | ALP40_04212 | Not Available | Positive | 225805 - 226653 | 30177.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
