Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | ALP40_04165 | Not Available | Negative | 175155 - 175790 | 22964.3 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | ALP40_05390 | Not Available | Negative | 175947 - 177257 | 46419.9 |
| toluene tolerance protein ttg2f | ALP40_04167 | Not Available | Negative | 177235 - 177474 | 8891.65 |
| stas domain-containing protein | ALP40_04168 | Not Available | Negative | 177588 - 177893 | 10765.1 |
| toluene tolerance protein | ALP40_04169 | Not Available | Negative | 177890 - 178543 | 23871.4 |
| toluene tolerance protein ttg2c | ALP40_04170 | Not Available | Negative | 178554 - 179021 | 16361.8 |
| toluene tolerance proteinttg2b | ALP40_04171 | Not Available | Negative | 179021 - 179818 | 28326.2 |
| toluene tolerance protein ttg2a | ALP40_04172 | Not Available | Negative | 179818 - 180627 | 29561.0 |
| arabinose 5-phosphate isomerase | ALP40_04173 | Not Available | Positive | 180959 - 181933 | 34598.2 |
| phosphatase, yrbi protein | ALP40_04174 | Not Available | Positive | 181933 - 182472 | 19433.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
