Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative proteinh-quinone oxidoreductase subunit h | ALP40_01263 | Not Available | Positive | 87858 - 88865 | 37459.5 |
| putative proteinh-quinone oxidoreductase subunit i | ALP40_01264 | Not Available | Positive | 88877 - 89425 | 20532.7 |
| putative proteinh:ubiquinone oxidoreductase subunit j | ALP40_01265 | Not Available | Positive | 89436 - 89945 | 17982.6 |
| putative proteinh-quinone oxidoreductase subunit k | ALP40_01266 | Not Available | Positive | 89942 - 90250 | 11005.0 |
| putative proteinh:ubiquinone oxidoreductase subunit l | ALP40_01267 | Not Available | Positive | 90247 - 92100 | 66576.5 |
| putative proteinh:ubiquinone oxidoreductase subunit m | ALP40_01268 | Not Available | Positive | 92140 - 93672 | 55729.8 |
| putative proteinh-quinone oxidoreductase subunit n | ALP40_01269 | Not Available | Positive | 93680 - 95149 | 51942.4 |
| hypothetical protein | ALP40_01270 | Not Available | Negative | 95206 - 96270 | 38853.2 |
| sensor histidine kinase | ALP40_01271 | Not Available | Negative | 96458 - 97780 | 49140.6 |
| dna-binding response regulator | ALP40_01272 | Not Available | Negative | 97777 - 98445 | 24674.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
