Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsrh protein | ALP40_01234 | Not Available | Positive | 52669 - 52962 | 10489.6 |
| sulfurtransferase | ALP40_01235 | Not Available | Positive | 52959 - 53294 | 12296.1 |
| anthranilate phosphoribosyltransferase like | ALP40_100015 | Not Available | Positive | 53291 - 54292 | 36991.5 |
| glutathione s-transferase domain-containing protein | ALP40_01236 | Not Available | Positive | 54401 - 55399 | 38179.7 |
| siroheme synthase | ALP40_04692 | Not Available | Negative | 55445 - 56839 | 50211.9 |
| serine--trna ligase | ALP40_01238 | Not Available | Negative | 56840 - 58120 | 47094.2 |
| putative fluoride ion transporter crcb | ALP40_01239 | Not Available | Negative | 58137 - 58511 | 13156.5 |
| recombination factor protein rara | ALP40_01240 | Not Available | Negative | 58511 - 59833 | 48915.3 |
| outer-membrane lipoprotein carrier protein | ALP40_01241 | Not Available | Negative | 59853 - 60476 | 22933.6 |
| cell division ftsk/spoiiie protein | ALP40_01242 | Not Available | Negative | 60554 - 62956 | 87516.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
