Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas viridiflava strain ICMP 19473 PvrICMP19473_Contig_14,
Gene Summary
Adenine Count
1156687 bp
Thymine Count
1166572 bp
Guanine Count
1680011 bp
Cytosine Count
1663355 bp
Genome Length
5672890 bp
Protein-coding Genes
4669 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | ALP40_02638 | Not Available | Positive | 1083847 - 1085643 | 65664.5 |
| hypothetical protein | ALP40_02639 | Not Available | Negative | 1085698 - 1086069 | 13979.7 |
| hypothetical protein | ALP40_05023 | Not Available | Positive | 1086102 - 1086584 | 17186.5 |
| 5'-nucleotidase sure | ALP40_02641 | Not Available | Positive | 1086607 - 1087473 | 31145.4 |
| endoribonuclease l-psp protein | ALP40_05024 | Not Available | Negative | 1087474 - 1088151 | 25455.6 |
| dna topoisomerase | ALP40_02643 | Not Available | Negative | 1087935 - 1089911 | 72379.6 |
| nitrite reductase small subunit | ALP40_02644 | Not Available | Negative | 1090184 - 1090567 | 13927.5 |
| fad-dependent pyridine nucleotide-disulfide oxidoreductase | ALP40_05026 | Not Available | Negative | 1090567 - 1093197 | 95382.1 |
| acetyltransferase | ALP40_05027 | Not Available | Positive | 1093625 - 1094203 | 21738.2 |
| chemotaxis protein | ALP40_02646 | Not Available | Positive | 1094353 - 1096314 | 70902.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
