Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4398 domain-containing protein | PviCFBP13507_04880 | Not Available | Negative | 1113915 - 1114697 | 28326.5 |
| duf4398 domain-containing protein | PviCFBP13507_04885 | Not Available | Negative | 1114758 - 1115171 | 14664.3 |
| pilin assembly protein | PviCFBP13507_04890 | Not Available | Negative | 1115426 - 1115785 | 13480.0 |
| phosphoenolpyruvate carboxylase | PviCFBP13507_04895 | Not Available | Positive | 1116038 - 1118674 | 97664.2 |
| hypothetical protein | PviCFBP13507_04900 | Not Available | Positive | 1118723 - 1118935 | 7533.34 |
| adenylate kinase | PviCFBP13507_04905 | Not Available | Positive | 1118956 - 1119603 | 23203.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | PviCFBP13507_04910 | Not Available | Positive | 1119689 - 1120363 | 23826.9 |
| hypothetical protein | PviCFBP13507_04915 | Not Available | Positive | 1120562 - 1120873 | 11254.2 |
| hypothetical protein | PviCFBP13507_04920 | Not Available | Positive | 1120870 - 1121739 | 32895.6 |
| 2-methylisocitrate lyase | PviCFBP13507_04925 | Not Available | Positive | 1121789 - 1122622 | 29032.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
