Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | PviCFBP13507_04830 | Not Available | Positive | 1101984 - 1104344 | 86025.1 |
| chemotaxis response regulator protein-glutamate methylesterase | PviCFBP13507_04835 | Not Available | Positive | 1104341 - 1105351 | 35921.9 |
| diguanylate cyclase response regulator | PviCFBP13507_04840 | Not Available | Positive | 1105397 - 1106401 | 37053.4 |
| peptide chain release factor 2 | PviCFBP13507_04845 | Not Available | Positive | 1106648 - 1107743 | 41134.1 |
| lysine--trna ligase | PviCFBP13507_04850 | Not Available | Positive | 1107867 - 1109369 | 56980.0 |
| tetr family transcriptional regulator | PviCFBP13507_04855 | Not Available | Positive | 1109447 - 1110172 | 27252.1 |
| hypothetical protein | PviCFBP13507_04860 | Not Available | Positive | 1110198 - 1110743 | 20050.7 |
| flavohemoglobin expression-modulating qegla motif protein | PviCFBP13507_04865 | Not Available | Positive | 1110777 - 1112054 | 47832.4 |
| alpha/beta hydrolase | PviCFBP13507_04870 | Not Available | Positive | 1112628 - 1113530 | 33197.0 |
| hypothetical protein | PviCFBP13507_04875 | Not Available | Positive | 1113527 - 1113850 | 11692.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
