Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr02285 family protein | PviCFBP13507_04780 | Not Available | Negative | 1089608 - 1090486 | 32654.8 |
| hypothetical protein | PviCFBP13507_04785 | Not Available | Positive | 1090705 - 1091247 | 20732.7 |
| single-stranded-dna-specific exonuclease recj | PviCFBP13507_04790 | Not Available | Positive | 1091299 - 1093014 | 62715.0 |
| nadh:flavin oxidoreductase/nadh oxidase | PviCFBP13507_04795 | Not Available | Positive | 1093126 - 1094232 | 40494.1 |
| hybrid sensor histidine kinase/response regulator | PviCFBP13507_04800 | Not Available | Negative | 1094365 - 1096461 | 76826.1 |
| duf533 domain-containing protein | PviCFBP13507_04805 | Not Available | Positive | 1096755 - 1097507 | 26206.2 |
| methyl-accepting chemotaxis protein | PviCFBP13507_04810 | Not Available | Positive | 1097859 - 1099481 | 58961.7 |
| chemotaxis protein chew | PviCFBP13507_04815 | Not Available | Positive | 1099491 - 1100027 | 20103.3 |
| chemotaxis protein cher | PviCFBP13507_04820 | Not Available | Positive | 1100024 - 1101298 | 46193.2 |
| chemotaxis protein chew | PviCFBP13507_04825 | Not Available | Positive | 1101298 - 1101987 | 25176.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
