Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l19 | PviCFBP13507_04730 | Not Available | Positive | 1076968 - 1077318 | 12955.9 |
| site-specific tyrosine recombinase xerd | PviCFBP13507_04735 | Not Available | Positive | 1077420 - 1078316 | 33866.9 |
| hypothetical protein | PviCFBP13507_04740 | Not Available | Positive | 1078466 - 1079197 | 27248.8 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | PviCFBP13507_04745 | Not Available | Positive | 1079443 - 1080183 | 26413.1 |
| homoserine dehydrogenase | PviCFBP13507_04750 | Not Available | Positive | 1080317 - 1081621 | 46254.0 |
| threonine synthase | PviCFBP13507_04755 | Not Available | Positive | 1081672 - 1083081 | 52005.3 |
| hybrid sensor histidine kinase/response regulator | PviCFBP13507_04760 | Not Available | Positive | 1083202 - 1086843 | 134260.0 |
| hypothetical protein | PviCFBP13507_04765 | Not Available | Positive | 1086945 - 1088234 | 46758.8 |
| dna-binding response regulator | PviCFBP13507_04770 | Not Available | Negative | 1088203 - 1088829 | 22581.4 |
| duf3509 domain-containing protein | PviCFBP13507_04775 | Not Available | Positive | 1089200 - 1089496 | 10445.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
