Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter outer membrane beta-barrel domain-containing protein | PviCFBP13507_04625 | Not Available | Negative | 1053090 - 1055390 | 80591.5 |
| copper oxidase | PviCFBP13507_04635 | Not Available | Positive | 1057182 - 1058555 | 50700.6 |
| trna adenosine(34) deaminase tada | PviCFBP13507_04640 | Not Available | Positive | 1058555 - 1059058 | 18028.8 |
| membrane-bound lytic murein transglycosylase mltf | PviCFBP13507_04645 | Not Available | Negative | 1059055 - 1060545 | 55923.2 |
| phosphoribosylformylglycinamidine synthase | PviCFBP13507_04650 | Not Available | Positive | 1060759 - 1064655 | 140755.0 |
| ngg1p interacting factor nif3 | PviCFBP13507_04655 | Not Available | Positive | 1064672 - 1064983 | 11522.6 |
| hypothetical protein | PviCFBP13507_04660 | Not Available | Negative | 1065190 - 1065753 | 21430.9 |
| nudix hydrolase | PviCFBP13507_04665 | Not Available | Negative | 1065804 - 1066355 | 20851.1 |
| coa pyrophosphatase | PviCFBP13507_04670 | Not Available | Positive | 1066505 - 1067101 | 22250.5 |
| gamma carbonic anhydrase family protein | PviCFBP13507_04675 | Not Available | Positive | 1067160 - 1067684 | 18621.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
