Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus biogenesis/stability protein pilw | PviCFBP13507_04520 | Not Available | Positive | 1030808 - 1031566 | 28615.9 |
| duf4115 domain-containing protein | PviCFBP13507_04525 | Not Available | Positive | 1031566 - 1032567 | 35255.7 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | PviCFBP13507_04530 | Not Available | Positive | 1032571 - 1033680 | 39766.2 |
| histidine--trna ligase | PviCFBP13507_04535 | Not Available | Positive | 1033703 - 1034992 | 47948.6 |
| gtp-binding protein | PviCFBP13507_04540 | Not Available | Positive | 1035032 - 1035673 | 22830.9 |
| outer membrane protein assembly factor bamb | PviCFBP13507_04545 | Not Available | Positive | 1035666 - 1036817 | 40835.7 |
| ribosome biogenesis gtpase der | PviCFBP13507_04550 | Not Available | Positive | 1036958 - 1038427 | 54896.9 |
| pyridoxal phosphate-dependent aminotransferase | PviCFBP13507_04555 | Not Available | Positive | 1038548 - 1039696 | 42636.0 |
| amidohydrolase | PviCFBP13507_04560 | Not Available | Positive | 1039684 - 1040475 | 29598.1 |
| hypothetical protein | PviCFBP13507_04565 | Not Available | Positive | 1040533 - 1040964 | 14837.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
