Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 1014386 - 1014470 | Not Available |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | PviCFBP13507_04420 | Not Available | Positive | 1014588 - 1015652 | 38716.2 |
| trna guanosine(34) transglycosylase tgt | PviCFBP13507_04425 | Not Available | Positive | 1015667 - 1016782 | 41064.9 |
| preprotein translocase subunit yajc | PviCFBP13507_04430 | Not Available | Positive | 1016838 - 1017173 | 11826.5 |
| protein translocase subunit secd | PviCFBP13507_04435 | Not Available | Positive | 1017236 - 1019104 | 67393.5 |
| protein translocase subunit secf | PviCFBP13507_04440 | Not Available | Positive | 1019114 - 1020025 | 33073.7 |
| glycine zipper 2tm domain-containing protein | PviCFBP13507_04445 | Not Available | Positive | 1020136 - 1020675 | 18637.4 |
| inositol monophosphatase | PviCFBP13507_04450 | Not Available | Negative | 1020739 - 1021554 | 29559.3 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | PviCFBP13507_04455 | Not Available | Positive | 1021771 - 1022538 | 27772.4 |
| serine o-acetyltransferase | PviCFBP13507_04460 | Not Available | Positive | 1022538 - 1023326 | 28438.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
