Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | PviCFBP13507_00280 | Not Available | Negative | 57534 - 57932 | 14781.1 |
| dna topoisomerase iii | PviCFBP13507_00285 | Not Available | Negative | 57996 - 59972 | 72230.5 |
| nitrite reductase (nad(p)h) small subunit | PviCFBP13507_00290 | Not Available | Negative | 60435 - 60818 | 13928.4 |
| nitrite reductase (nad(p)h) | PviCFBP13507_00295 | Not Available | Negative | 60818 - 63379 | 92957.1 |
| gnat family n-acetyltransferase | PviCFBP13507_00305 | Not Available | Positive | 64176 - 64700 | 19675.5 |
| collagenase-like protease | PviCFBP13507_00310 | Not Available | Negative | 64727 - 66733 | 74591.0 |
| histidinol phosphatase | PviCFBP13507_00315 | Not Available | Negative | 66852 - 67643 | 28420.6 |
| iron abc transporter permease | PviCFBP13507_00320 | Not Available | Negative | 67640 - 68662 | 35001.0 |
| abc transporter substrate-binding protein | PviCFBP13507_00325 | Not Available | Negative | 68659 - 69672 | 37539.9 |
| fadr family transcriptional regulator | PviCFBP13507_00330 | Not Available | Negative | 70023 - 70739 | 26447.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
