Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | PviCFBP13507_04160 | Not Available | Positive | 960326 - 961162 | 31619.6 |
| lyse family translocator | PviCFBP13507_04165 | Not Available | Positive | 961211 - 961780 | 19849.0 |
| no-inducible flavohemoprotein | PviCFBP13507_04170 | Not Available | Positive | 962013 - 963197 | 43111.7 |
| lipase | PviCFBP13507_04175 | Not Available | Negative | 963201 - 964148 | 34942.7 |
| transketolase | PviCFBP13507_04180 | Not Available | Negative | 964416 - 965435 | 36175.9 |
| transketolase | PviCFBP13507_04185 | Not Available | Negative | 965432 - 966280 | 30911.4 |
| mfs transporter | PviCFBP13507_04190 | Not Available | Negative | 966299 - 967600 | 47586.4 |
| short-chain dehydrogenase | PviCFBP13507_04195 | Not Available | Negative | 967712 - 968461 | 25678.2 |
| lysr family transcriptional regulator | PviCFBP13507_04200 | Not Available | Positive | 968650 - 969567 | 33956.8 |
| duf2945 domain-containing protein | PviCFBP13507_04205 | Not Available | Negative | 969576 - 969785 | 7771.22 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
