Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | PviCFBP13507_04110 | Not Available | Positive | 950515 - 951399 | 33701.6 |
| branched-chain amino acid aminotransferase | PviCFBP13507_04115 | Not Available | Positive | 951577 - 952596 | 37004.0 |
| atpase | PviCFBP13507_04120 | Not Available | Negative | 953012 - 953983 | 36289.9 |
| arti protein | PviCFBP13507_04125 | Not Available | Negative | 954082 - 954870 | 29164.0 |
| hypothetical protein | PviCFBP13507_04130 | Not Available | Negative | 954999 - 955658 | 24093.8 |
| hypothetical protein | PviCFBP13507_04135 | Not Available | Positive | 955720 - 955908 | 6775.9 |
| superoxide dismutase | PviCFBP13507_04140 | Not Available | Positive | 955905 - 956423 | 17602.0 |
| mfs transporter | PviCFBP13507_04145 | Not Available | Negative | 956640 - 957827 | 43044.2 |
| carbonic anhydrase | PviCFBP13507_04150 | Not Available | Negative | 957934 - 958653 | 25267.8 |
| hypothetical protein | PviCFBP13507_04155 | Not Available | Negative | 958860 - 960107 | 46575.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
