Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_04060 | Not Available | Negative | 942186 - 942509 | 11538.9 |
| gnat family n-acetyltransferase | PviCFBP13507_04065 | Not Available | Negative | 942553 - 943014 | 17300.8 |
| chemotaxis protein chev | PviCFBP13507_04070 | Not Available | Negative | 943077 - 943973 | 31924.8 |
| disulfide bond formation protein b | PviCFBP13507_04075 | Not Available | Positive | 944426 - 944935 | 18292.2 |
| hypothetical protein | PviCFBP13507_04080 | Not Available | Negative | 945113 - 945370 | 9387.32 |
| ubiquinol oxidase subunit ii | PviCFBP13507_04085 | Not Available | Positive | 945399 - 946340 | 34860.4 |
| cytochrome o ubiquinol oxidase subunit i | PviCFBP13507_04090 | Not Available | Positive | 946344 - 948356 | 74281.9 |
| cytochrome o ubiquinol oxidase subunit iii | PviCFBP13507_04095 | Not Available | Positive | 948359 - 948991 | 23140.3 |
| cytochrome o ubiquinol oxidase subunit iv | PviCFBP13507_04100 | Not Available | Positive | 948991 - 949323 | 12332.5 |
| protoheme ix farnesyltransferase | PviCFBP13507_04105 | Not Available | Positive | 949334 - 950221 | 32392.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
