Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhizopine-binding protein | PviCFBP13507_00230 | Not Available | Positive | 46555 - 47475 | 33152.0 |
| dna/rna non-specific endonuclease | PviCFBP13507_00235 | Not Available | Negative | 47503 - 48453 | 35525.8 |
| trap transporter small permease | PviCFBP13507_00240 | Not Available | Positive | 49016 - 49573 | 20477.8 |
| l-dehydroascorbate transporter large permease subunit | PviCFBP13507_00245 | Not Available | Positive | 49570 - 50850 | 44882.5 |
| trap transporter substrate-binding protein | PviCFBP13507_00250 | Not Available | Positive | 50914 - 51933 | 37108.6 |
| methyl-accepting chemotaxis protein | PviCFBP13507_00255 | Not Available | Positive | 52116 - 53729 | 57044.0 |
| methyl-accepting chemotaxis protein | PviCFBP13507_00260 | Not Available | Positive | 53907 - 55703 | 65657.5 |
| ph domain-containing protein | PviCFBP13507_00265 | Not Available | Negative | 55759 - 56130 | 13966.7 |
| cation transporter | PviCFBP13507_00270 | Not Available | Positive | 56333 - 56644 | 11098.3 |
| 5'/3'-nucleotidase sure | PviCFBP13507_00275 | Not Available | Positive | 56751 - 57524 | 27981.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
