Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | PviCFBP13507_03860 | Not Available | Negative | 894962 - 895174 | 7681.04 |
| glycine cleavage system aminomethyltransferase gcvt | PviCFBP13507_03865 | Not Available | Negative | 895567 - 896691 | 40316.1 |
| glycine dehydrogenase (aminomethyl-transferring) | PviCFBP13507_03870 | Not Available | Negative | 896766 - 899630 | 103805.0 |
| glycine cleavage system protein gcvh | PviCFBP13507_03875 | Not Available | Negative | 899641 - 900024 | 13877.1 |
| two-component system response regulator | PviCFBP13507_03880 | Not Available | Negative | 900323 - 902440 | 79204.8 |
| response regulator | PviCFBP13507_03885 | Not Available | Negative | 902450 - 902839 | 14118.3 |
| pas domain-containing sensor histidine kinase | PviCFBP13507_03890 | Not Available | Negative | 902824 - 904542 | 63559.7 |
| fis family transcriptional regulator | PviCFBP13507_03895 | Not Available | Negative | 904725 - 906233 | 54707.1 |
| duf5064 domain-containing protein | PviCFBP13507_03900 | Not Available | Negative | 906499 - 906855 | 13308.5 |
| duf454 domain-containing protein | PviCFBP13507_03905 | Not Available | Negative | 906937 - 907407 | 17573.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
