Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | PviCFBP13507_03760 | Not Available | Positive | 874880 - 876061 | 43336.2 |
| amino acid abc transporter permease | PviCFBP13507_03765 | Not Available | Positive | 876072 - 877169 | 40523.0 |
| amino acid abc transporter atp-binding protein | PviCFBP13507_03770 | Not Available | Positive | 877180 - 877944 | 28871.5 |
| hypothetical protein | PviCFBP13507_03775 | Not Available | Negative | 878001 - 878120 | 4472.34 |
| cyanate mfs transporter | PviCFBP13507_03780 | Not Available | Positive | 878110 - 879342 | 43168.0 |
| nuclear transport factor 2 family protein | PviCFBP13507_03785 | Not Available | Positive | 879427 - 879918 | 18597.8 |
| giy-yig nuclease family protein | PviCFBP13507_03790 | Not Available | Positive | 879944 - 880264 | 11734.3 |
| glutathione s-transferase family protein | PviCFBP13507_03795 | Not Available | Positive | 880329 - 881261 | 33921.5 |
| glutaredoxin family protein | PviCFBP13507_03800 | Not Available | Negative | 881401 - 881751 | 13064.0 |
| nucleoid-associated protein yejk | PviCFBP13507_03805 | Not Available | Negative | 881757 - 882758 | 37491.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
