Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phoh family protein | PviCFBP13507_03710 | Not Available | Positive | 866319 - 867713 | 51827.2 |
| cyclic pyranopterin monophosphate synthase moac | PviCFBP13507_03715 | Not Available | Positive | 867857 - 868342 | 16924.8 |
| molybdopterin synthase sulfur carrier subunit | PviCFBP13507_03720 | Not Available | Positive | 868339 - 868584 | 9211.86 |
| molybdopterin synthase catalytic subunit moae | PviCFBP13507_03725 | Not Available | Positive | 868587 - 869036 | 16582.7 |
| curli production assembly protein csgg | PviCFBP13507_03730 | Not Available | Positive | 869232 - 869915 | 24389.1 |
| duf4810 domain-containing protein | PviCFBP13507_03735 | Not Available | Positive | 869939 - 870316 | 13942.5 |
| hypothetical protein | PviCFBP13507_03740 | Not Available | Positive | 870313 - 870972 | 22840.3 |
| atp-dependent rna helicase rhlb | PviCFBP13507_03745 | Not Available | Negative | 871055 - 872521 | 54369.5 |
| carboxylesterase | PviCFBP13507_03750 | Not Available | Negative | 872639 - 873298 | 24101.7 |
| amino acid abc transporter substrate-binding protein | PviCFBP13507_03755 | Not Available | Positive | 873781 - 874809 | 36485.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
