Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannuronate-specific alginate lyase | PviCFBP13507_03660 | Not Available | Negative | 851801 - 852934 | 42479.6 |
| alginate o-acetyltransferase | PviCFBP13507_03665 | Not Available | Negative | 852943 - 854382 | 53481.0 |
| right-handed parallel beta-helix repeat-containing protein | PviCFBP13507_03670 | Not Available | Negative | 854397 - 856007 | 59463.2 |
| alginate export family protein | PviCFBP13507_03675 | Not Available | Negative | 856034 - 857515 | 55104.5 |
| sel1 repeat family protein | PviCFBP13507_03680 | Not Available | Negative | 857512 - 858924 | 50990.4 |
| hemolysin d | PviCFBP13507_03685 | Not Available | Negative | 858927 - 860099 | 41963.4 |
| glycosyl transferase | PviCFBP13507_03690 | Not Available | Negative | 860140 - 861621 | 56047.0 |
| nucleotide sugar dehydrogenase | PviCFBP13507_03695 | Not Available | Negative | 861720 - 863036 | 47655.1 |
| peroxide stress protein yaaa | PviCFBP13507_03700 | Not Available | Negative | 863854 - 864633 | 29472.2 |
| polysaccharide deacetylase | PviCFBP13507_03705 | Not Available | Positive | 864845 - 866023 | 44754.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
