Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1656 domain-containing protein | PviCFBP13507_03610 | Not Available | Positive | 840167 - 840367 | 7735.86 |
| efflux transporter periplasmic adaptor subunit | PviCFBP13507_03615 | Not Available | Positive | 840391 - 841245 | 31785.2 |
| short-chain dehydrogenase | PviCFBP13507_03620 | Not Available | Negative | 841827 - 842645 | 28727.8 |
| multidrug transporter | PviCFBP13507_03625 | Not Available | Negative | 842663 - 843127 | 17154.7 |
| hypothetical protein | PviCFBP13507_03630 | Not Available | Negative | 843272 - 843484 | 7393.69 |
| hypothetical protein | PviCFBP13507_03635 | Not Available | Positive | 843991 - 846594 | 96622.6 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | PviCFBP13507_03640 | Not Available | Negative | 846679 - 848130 | 53416.0 |
| alginate o-acetyltransferase algf | PviCFBP13507_03645 | Not Available | Negative | 848247 - 848915 | 23453.0 |
| alginate o-acetyltransferase | PviCFBP13507_03650 | Not Available | Negative | 848928 - 850103 | 43238.9 |
| mboat family protein | PviCFBP13507_03655 | Not Available | Negative | 850114 - 851670 | 58476.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
