Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family protein | PviCFBP13507_03510 | Not Available | Negative | 815398 - 817518 | 81313.8 |
| hypothetical protein | PviCFBP13507_03515 | Not Available | Negative | 817531 - 819747 | 78613.4 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | PviCFBP13507_03520 | Not Available | Negative | 819888 - 821126 | 45687.6 |
| hypothetical protein | PviCFBP13507_03525 | Not Available | Negative | 821807 - 822079 | 9801.45 |
| phosphate-starvation-inducible protein psie | PviCFBP13507_03530 | Not Available | Positive | 822449 - 822937 | 17761.9 |
| hypothetical protein | PviCFBP13507_03535 | Not Available | Negative | 823243 - 823572 | 12724.0 |
| duf3509 domain-containing protein | PviCFBP13507_03540 | Not Available | Negative | 823856 - 824188 | 12159.6 |
| ribosomal subunit interface protein | PviCFBP13507_03545 | Not Available | Negative | 824959 - 825387 | 16060.6 |
| tonb-dependent siderophore receptor | PviCFBP13507_03550 | Not Available | Negative | 825848 - 828196 | 85316.0 |
| hypothetical protein | PviCFBP13507_03555 | Not Available | Negative | 828380 - 829357 | 35321.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
