Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix-type transcriptional regulator | PviCFBP13507_03460 | Not Available | Positive | 805720 - 806685 | 36213.6 |
| hypothetical protein | PviCFBP13507_03465 | Not Available | Negative | 806713 - 807318 | 23250.9 |
| pas domain-containing protein | PviCFBP13507_03470 | Not Available | Negative | 807396 - 807851 | 16986.1 |
| flavodoxin | PviCFBP13507_03475 | Not Available | Positive | 807997 - 808449 | 15846.0 |
| serine/threonine protein kinase | PviCFBP13507_03480 | Not Available | Positive | 808562 - 809473 | 32329.2 |
| hypothetical protein | PviCFBP13507_03485 | Not Available | Positive | 809716 - 810273 | 20806.2 |
| hypothetical protein | PviCFBP13507_03490 | Not Available | Negative | 810488 - 811291 | 30283.9 |
| amino acid dehydrogenase | PviCFBP13507_03495 | Not Available | Positive | 811455 - 812474 | 35766.0 |
| hypothetical protein | PviCFBP13507_03500 | Not Available | Negative | 812530 - 813402 | 31602.2 |
| bacteriophage n4 adsorption protein a | PviCFBP13507_03505 | Not Available | Negative | 813437 - 815401 | 72820.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
