Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | PviCFBP13507_00180 | Not Available | Positive | 37223 - 37624 | 14312.4 |
| mn2+/fe2+ transporter | PviCFBP13507_00185 | Not Available | Negative | 37808 - 39109 | 47285.6 |
| hydrolase | PviCFBP13507_00190 | Not Available | Positive | 39455 - 40201 | 26683.9 |
| mfs transporter | PviCFBP13507_00195 | Not Available | Negative | 40188 - 41474 | 44258.5 |
| duf1289 domain-containing protein | PviCFBP13507_00200 | Not Available | Negative | 41571 - 41753 | 6897.62 |
| hypothetical protein | PviCFBP13507_00205 | Not Available | Negative | 41757 - 42128 | 13978.5 |
| gluconolactonase | PviCFBP13507_00210 | Not Available | Positive | 42314 - 43405 | 39836.0 |
| duf1206 domain-containing protein | PviCFBP13507_00215 | Not Available | Positive | 43528 - 44361 | 29248.9 |
| hypothetical protein | PviCFBP13507_00220 | Not Available | Negative | 44368 - 44553 | 6753.1 |
| methyl-accepting chemotaxis protein | PviCFBP13507_00225 | Not Available | Positive | 44552 - 46537 | 71661.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
