Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine utilization flavin reductase protein f | PviCFBP13507_03305 | Not Available | Negative | 778737 - 779270 | 18784.2 |
| pyrimidine utilization protein d | PviCFBP13507_03310 | Not Available | Negative | 779283 - 780062 | 28691.2 |
| pyrimidine utilization protein c | PviCFBP13507_03315 | Not Available | Negative | 780104 - 780487 | 13703.6 |
| pyrimidine utilization protein b | PviCFBP13507_03320 | Not Available | Negative | 780498 - 781238 | 26440.4 |
| pyrimidine utilization protein a | PviCFBP13507_03325 | Not Available | Negative | 781238 - 782320 | 39578.0 |
| pyrimidine utilization regulatory protein r | PviCFBP13507_03330 | Not Available | Positive | 782605 - 783348 | 27814.7 |
| bmp family abc transporter substrate-binding protein | PviCFBP13507_03335 | Not Available | Positive | 783731 - 784822 | 39168.6 |
| abc transporter atp-binding protein | PviCFBP13507_03340 | Not Available | Positive | 784819 - 786333 | 54372.2 |
| abc transporter permease | PviCFBP13507_03345 | Not Available | Positive | 786326 - 787441 | 40515.9 |
| abc transporter permease | PviCFBP13507_03350 | Not Available | Positive | 787441 - 788367 | 32434.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
