Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m48 | PviCFBP13507_03255 | Not Available | Positive | 764123 - 764938 | 28964.5 |
| upf0016 domain-containing protein | PviCFBP13507_03260 | Not Available | Negative | 764999 - 765583 | 20732.8 |
| 16s rrna methyltransferase | PviCFBP13507_03265 | Not Available | Negative | 765830 - 766828 | 36047.3 |
| 2-hydroxyacid dehydrogenase | PviCFBP13507_03270 | Not Available | Negative | 767016 - 767984 | 34111.3 |
| lysine transporter lyse | PviCFBP13507_03275 | Not Available | Positive | 768072 - 768701 | 22231.5 |
| fatty acid--coa ligase | PviCFBP13507_03280 | Not Available | Positive | 768885 - 770567 | 62291.2 |
| duf1302 domain-containing protein | PviCFBP13507_03285 | Not Available | Positive | 770930 - 772867 | 69918.1 |
| duf1329 domain-containing protein | PviCFBP13507_03290 | Not Available | Positive | 772898 - 774262 | 50694.9 |
| helix-turn-helix transcriptional regulator | PviCFBP13507_03295 | Not Available | Positive | 774484 - 777216 | 101617.0 |
| metal-dependent phosphohydrolase | PviCFBP13507_03300 | Not Available | Negative | 777213 - 778412 | 44321.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
