Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr02450 family trp-rich protein | PviCFBP13507_03155 | Not Available | Negative | 747314 - 747529 | 8407.24 |
| nad(p)/fad-dependent oxidoreductase | PviCFBP13507_03160 | Not Available | Negative | 747526 - 748512 | 35887.5 |
| tigr01777 family protein | PviCFBP13507_03165 | Not Available | Positive | 748813 - 749715 | 32900.1 |
| ferrochelatase | PviCFBP13507_03170 | Not Available | Positive | 749739 - 750761 | 38372.6 |
| uracil permease | PviCFBP13507_03175 | Not Available | Negative | 750854 - 752131 | 44402.8 |
| uracil phosphoribosyltransferase | PviCFBP13507_03180 | Not Available | Negative | 752136 - 752774 | 22879.1 |
| hypoxanthine-guanine phosphoribosyltransferase | PviCFBP13507_03185 | Not Available | Positive | 752987 - 753544 | 20677.8 |
| hypothetical protein | PviCFBP13507_03190 | Not Available | Positive | 753614 - 754108 | 18202.1 |
| hypothetical protein | PviCFBP13507_03195 | Not Available | Positive | 754175 - 754462 | 11134.2 |
| amino acid abc transporter permease | PviCFBP13507_03200 | Not Available | Negative | 754596 - 755423 | 30324.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
