Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ykgj family cysteine cluster protein | PviCFBP13507_03105 | Not Available | Negative | 738471 - 738770 | 11073.3 |
| duf2878 domain-containing protein | PviCFBP13507_03110 | Not Available | Negative | 738782 - 739294 | 18347.9 |
| class i sam-dependent methyltransferase | PviCFBP13507_03115 | Not Available | Negative | 739287 - 740555 | 47411.2 |
| duf1365 domain-containing protein | PviCFBP13507_03120 | Not Available | Negative | 740542 - 741342 | 30149.1 |
| fad-dependent oxidoreductase | PviCFBP13507_03125 | Not Available | Negative | 741339 - 742586 | 46433.9 |
| kr domain-containing protein | PviCFBP13507_03130 | Not Available | Negative | 742583 - 743383 | 28897.3 |
| nuclear transport factor 2 family protein | PviCFBP13507_03135 | Not Available | Negative | 743380 - 743805 | 16679.7 |
| deoxyribodipyrimidine photo-lyase | PviCFBP13507_03140 | Not Available | Negative | 743798 - 745246 | 54813.0 |
| merr family dna-binding transcriptional regulator | PviCFBP13507_03145 | Not Available | Negative | 745256 - 746158 | 33906.0 |
| duf1722 domain-containing protein | PviCFBP13507_03150 | Not Available | Negative | 746161 - 747123 | 35830.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
