Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 729462 - 729536 | Not Available |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | PviCFBP13507_03060 | Not Available | Negative | 729574 - 730422 | 30473.8 |
| lipoprotein localization factor lolb | PviCFBP13507_03065 | Not Available | Negative | 730425 - 731042 | 22997.4 |
| tetratricopeptide repeat protein | PviCFBP13507_03070 | Not Available | Negative | 731047 - 732774 | 64312.0 |
| glutamyl-trna reductase | PviCFBP13507_03075 | Not Available | Positive | 733001 - 734278 | 46222.5 |
| peptide chain release factor 1 | PviCFBP13507_03080 | Not Available | Positive | 734275 - 735357 | 40083.2 |
| peptide chain release factor n(5)-glutamine methyltransferase | PviCFBP13507_03085 | Not Available | Positive | 735358 - 736191 | 30508.5 |
| molybdopterin-synthase adenylyltransferase moeb | PviCFBP13507_03090 | Not Available | Positive | 736176 - 736955 | 27334.1 |
| glutamate racemase | PviCFBP13507_03095 | Not Available | Positive | 736948 - 737763 | 29468.7 |
| acyloxyacyl hydrolase | PviCFBP13507_03100 | Not Available | Positive | 737880 - 738398 | 19173.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
