Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | PviCFBP13507_02955 | Not Available | Negative | 703693 - 704598 | 32973.2 |
| dtdp-glucose 4,6-dehydratase | PviCFBP13507_02960 | Not Available | Negative | 704598 - 705671 | 40401.1 |
| hypothetical protein | PviCFBP13507_02965 | Not Available | Positive | 706126 - 708072 | 71851.5 |
| acyltransferase | PviCFBP13507_02970 | Not Available | Positive | 708185 - 709234 | 38999.6 |
| hypothetical protein | PviCFBP13507_02975 | Not Available | Positive | 709906 - 712188 | 83573.5 |
| glycosyl transferase | PviCFBP13507_02980 | Not Available | Positive | 712450 - 713409 | 36597.4 |
| hypothetical protein | PviCFBP13507_02985 | Not Available | Positive | 713409 - 714566 | 43421.7 |
| mboat family protein | PviCFBP13507_02990 | Not Available | Positive | 714637 - 716037 | 53406.9 |
| hypothetical protein | PviCFBP13507_02995 | Not Available | Positive | 716012 - 717250 | 46381.9 |
| hypothetical protein | PviCFBP13507_03000 | Not Available | Positive | 717305 - 719368 | 78531.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
