Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | PviCFBP13507_00130 | Not Available | Positive | 26457 - 28049 | 58678.6 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | PviCFBP13507_00135 | Not Available | Negative | 28025 - 31174 | 112013.0 |
| efflux transporter periplasmic adaptor subunit | PviCFBP13507_00140 | Not Available | Negative | 31208 - 32368 | 41227.4 |
| laci family dna-binding transcriptional regulator | PviCFBP13507_00145 | Not Available | Positive | 32549 - 33103 | 20332.8 |
| duf2946 domain-containing protein | PviCFBP13507_00150 | Not Available | Positive | 33267 - 33635 | 13059.2 |
| sco family protein | PviCFBP13507_00155 | Not Available | Positive | 33759 - 34364 | 22015.7 |
| copper chaperone pcu(a)c | PviCFBP13507_00160 | Not Available | Positive | 34364 - 34852 | 17028.6 |
| duf2188 domain-containing protein | PviCFBP13507_00165 | Not Available | Positive | 34942 - 35124 | 6686.03 |
| energy transducer tonb | PviCFBP13507_00170 | Not Available | Positive | 35596 - 36414 | 28679.8 |
| biopolymer transporter exbb | PviCFBP13507_00175 | Not Available | Positive | 36499 - 37221 | 25651.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
