Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal-protein-alanine n-acetyltransferase | PviCFBP13507_02855 | Not Available | Positive | 681538 - 681990 | 17141.7 |
| serine kinase/phosphatase | PviCFBP13507_02860 | Not Available | Negative | 681998 - 682405 | 14879.5 |
| carbonate dehydratase | PviCFBP13507_02865 | Not Available | Positive | 682592 - 683230 | 24169.9 |
| methyl-accepting chemotaxis protein | PviCFBP13507_02870 | Not Available | Negative | 683289 - 684962 | 59331.1 |
| phosphohydrolase | PviCFBP13507_02875 | Not Available | Negative | 685096 - 685755 | 24535.2 |
| phna protein alkylphosphonate uptake | PviCFBP13507_02880 | Not Available | Positive | 685880 - 686254 | 13304.7 |
| thiol-disulfide oxidoreductase dcc family protein | PviCFBP13507_02885 | Not Available | Positive | 686340 - 686783 | 17042.9 |
| sugar transporter | PviCFBP13507_02890 | Not Available | Positive | 687062 - 688273 | 42059.9 |
| phosphatidylcholine synthase | PviCFBP13507_02895 | Not Available | Negative | 688324 - 689043 | 26729.5 |
| hypothetical protein | PviCFBP13507_02900 | Not Available | Negative | 689132 - 691141 | 75978.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
