Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | PviCFBP13507_02805 | Not Available | Positive | 667744 - 669501 | 64285.2 |
| maltose alpha-d-glucosyltransferase | PviCFBP13507_02810 | Not Available | Negative | 670124 - 672190 | 76042.5 |
| hypothetical protein | PviCFBP13507_02815 | Not Available | Negative | 672386 - 673006 | 23122.8 |
| lysr family transcriptional regulator | PviCFBP13507_02820 | Not Available | Negative | 673003 - 673251 | 9087.06 |
| dj-1/pfpi family protein | PviCFBP13507_02825 | Not Available | Negative | 673550 - 674155 | 22203.3 |
| transcriptional regulator ftra | PviCFBP13507_02830 | Not Available | Positive | 674288 - 675241 | 34941.0 |
| chromosome partitioning protein para | PviCFBP13507_02835 | Not Available | Negative | 675807 - 678626 | 105708.0 |
| chromosome partitioning protein | PviCFBP13507_02840 | Not Available | Negative | 678623 - 679324 | 26639.6 |
| hypothetical protein | PviCFBP13507_02845 | Not Available | Negative | 679314 - 680591 | 49162.1 |
| energy transducer tonb | PviCFBP13507_02850 | Not Available | Positive | 680736 - 681545 | 29784.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
