Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase | PviCFBP13507_02755 | Not Available | Negative | 654520 - 655755 | 43007.8 |
| feruloyl-coa synthase | PviCFBP13507_02760 | Not Available | Negative | 655752 - 657521 | 64505.3 |
| salicylaldehyde dehydrogenase | PviCFBP13507_02765 | Not Available | Negative | 657791 - 659239 | 50561.7 |
| p-hydroxycinnamoyl coa hydratase/lyase | PviCFBP13507_02770 | Not Available | Negative | 659340 - 660170 | 31133.5 |
| marr family transcriptional regulator | PviCFBP13507_02775 | Not Available | Positive | 660379 - 660867 | 17845.8 |
| outer membrane porin, oprd family | PviCFBP13507_02780 | Not Available | Negative | 660923 - 662245 | 48149.9 |
| 3-(3-hydroxy-phenyl)propionate transporter mhpt | PviCFBP13507_02785 | Not Available | Positive | 662577 - 663785 | 41263.6 |
| phenol degradation protein meta | PviCFBP13507_02790 | Not Available | Negative | 664125 - 665072 | 34279.1 |
| coniferyl-alcohol dehydrogenase | PviCFBP13507_02795 | Not Available | Negative | 665158 - 665925 | 27515.1 |
| benzaldehyde dehydrogenase | PviCFBP13507_02800 | Not Available | Negative | 665984 - 667465 | 51559.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
