Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_02705 | Not Available | Negative | 646722 - 647105 | 13553.1 |
| sdr family nad(p)-dependent oxidoreductase | PviCFBP13507_02710 | Not Available | Negative | 647168 - 647956 | 27922.5 |
| tetr family transcriptional regulator | PviCFBP13507_02715 | Not Available | Positive | 648122 - 648715 | 20811.5 |
| allophanate hydrolase | PviCFBP13507_02720 | Not Available | Negative | 648761 - 649735 | 34167.1 |
| allophanate hydrolase | PviCFBP13507_02725 | Not Available | Negative | 649732 - 650604 | 32510.8 |
| lamb/ycsf family protein | PviCFBP13507_02730 | Not Available | Negative | 650719 - 651477 | 27590.0 |
| lysr family transcriptional regulator | PviCFBP13507_02735 | Not Available | Positive | 651607 - 652524 | 34464.4 |
| lysr family transcriptional regulator | PviCFBP13507_02740 | Not Available | Negative | 652521 - 653438 | 33901.0 |
| hypothetical protein | PviCFBP13507_02745 | Not Available | Positive | 653581 - 653988 | 15015.7 |
| hypothetical protein | PviCFBP13507_02750 | Not Available | Negative | 654009 - 654371 | 14138.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
