Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | PviCFBP13507_02655 | Not Available | Positive | 634259 - 635209 | 34615.0 |
| gntr family transcriptional regulator | PviCFBP13507_02660 | Not Available | Negative | 635210 - 635920 | 26028.3 |
| ggdef-domain containing protein | PviCFBP13507_02665 | Not Available | Negative | 636008 - 637951 | 71256.7 |
| nucleoside hydrolase | PviCFBP13507_02670 | Not Available | Positive | 638300 - 639304 | 35746.5 |
| peptidase s8 and s53 subtilisin kexin sedolisin | PviCFBP13507_02675 | Not Available | Positive | 639428 - 641191 | 64160.9 |
| atpase | PviCFBP13507_02680 | Not Available | Negative | 641207 - 641890 | 24821.4 |
| lysr family transcriptional regulator | PviCFBP13507_02685 | Not Available | Negative | 642041 - 642943 | 33398.5 |
| mfs transporter | PviCFBP13507_02690 | Not Available | Positive | 643032 - 644426 | 50150.5 |
| glucarate dehydratase | PviCFBP13507_02695 | Not Available | Positive | 644446 - 645720 | 46689.7 |
| nadph:quinone oxidoreductase | PviCFBP13507_02700 | Not Available | Negative | 645761 - 646681 | 33157.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
