Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_02485 | Not Available | Positive | 597668 - 598660 | 37590.6 |
| hypothetical protein | PviCFBP13507_02490 | Not Available | Positive | 599844 - 600068 | 8526.2 |
| methyltransferase | PviCFBP13507_02505 | Not Available | Negative | 602389 - 603027 | 22617.2 |
| hydroxyacid dehydrogenase | PviCFBP13507_02510 | Not Available | Negative | 603061 - 604035 | 34340.4 |
| hypothetical protein | PviCFBP13507_02525 | Not Available | Positive | 606386 - 606691 | 10878.2 |
| duf2251 domain-containing protein | PviCFBP13507_02530 | Not Available | Negative | 606699 - 607103 | 14581.9 |
| lysr family transcriptional regulator | PviCFBP13507_02535 | Not Available | Negative | 607328 - 608203 | 31334.2 |
| nmra family transcriptional regulator | PviCFBP13507_02540 | Not Available | Positive | 608336 - 609205 | 31200.9 |
| laci family transcriptional regulator | PviCFBP13507_02545 | Not Available | Negative | 609255 - 610304 | 37515.2 |
| ap endonuclease | PviCFBP13507_02550 | Not Available | Positive | 610450 - 611367 | 33629.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
