Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_26360 | Not Available | Negative | 5812104 - 5817281 | 189433.0 |
| hypothetical protein | PviCFBP13507_26365 | Not Available | Negative | 5817404 - 5818807 | 50577.6 |
| hypothetical protein | PviCFBP13507_26370 | Not Available | Positive | 5819030 - 5819560 | 19360.2 |
| hypothetical protein | PviCFBP13507_26375 | Not Available | Positive | 5819587 - 5820105 | 18995.3 |
| sugar-binding protein | PviCFBP13507_26380 | Not Available | Positive | 5820153 - 5821886 | 63637.5 |
| nadp-dependent oxidoreductase | PviCFBP13507_26385 | Not Available | Positive | 5821951 - 5822922 | 35858.3 |
| gntr family transcriptional regulator | PviCFBP13507_26390 | Not Available | Positive | 5823217 - 5823951 | 27516.0 |
| antimetabolite toxin biosynthesis protein mgob | PviCFBP13507_26395 | Not Available | Positive | 5824708 - 5825484 | 29241.9 |
| aminobenzoate oxygenase | PviCFBP13507_26400 | Not Available | Positive | 5825548 - 5826495 | 35515.8 |
| peptide transporter | PviCFBP13507_26405 | Not Available | Positive | 5826492 - 5829950 | 127195.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
