Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PviCFBP13507_26305 | Not Available | Negative | 5798467 - 5798868 | 15045.2 |
| hypothetical protein | PviCFBP13507_26315 | Not Available | Negative | 5799913 - 5800896 | 37644.1 |
| type i restriction endonuclease subunit s | PviCFBP13507_26320 | Not Available | Negative | 5800893 - 5802323 | 51081.9 |
| sam-dependent methyltransferase | PviCFBP13507_26325 | Not Available | Negative | 5802310 - 5803857 | 56925.5 |
| hypothetical protein | PviCFBP13507_26330 | Not Available | Negative | 5803911 - 5804597 | 25043.4 |
| hypothetical protein | PviCFBP13507_26335 | Not Available | Negative | 5804598 - 5805302 | 26512.4 |
| hypothetical protein | PviCFBP13507_26340 | Not Available | Negative | 5805299 - 5805943 | 24067.2 |
| type i restriction-modification system endonuclease | PviCFBP13507_26345 | Not Available | Negative | 5806022 - 5809498 | 131170.0 |
| hypothetical protein | PviCFBP13507_26350 | Not Available | Negative | 5809769 - 5810134 | 13322.9 |
| sugar-binding protein | PviCFBP13507_26355 | Not Available | Negative | 5810193 - 5812040 | 67998.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
