Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sir2 family nad-dependent protein deacetylase | PviCFBP13507_26255 | Not Available | Negative | 5783328 - 5784122 | 30196.0 |
| non-canonical purine ntp pyrophosphatase | PviCFBP13507_26260 | Not Available | Negative | 5784119 - 5784679 | 20526.9 |
| adenosine deaminase | PviCFBP13507_26265 | Not Available | Negative | 5784676 - 5785725 | 38731.0 |
| duf262 domain-containing protein | PviCFBP13507_26270 | Not Available | Negative | 5785980 - 5788376 | 89914.2 |
| hypothetical protein | PviCFBP13507_26275 | Not Available | Negative | 5788373 - 5790139 | 67835.5 |
| hypothetical protein | PviCFBP13507_26280 | Not Available | Positive | 5790286 - 5790504 | 7977.94 |
| site-specific dna-methyltransferase | PviCFBP13507_26285 | Not Available | Positive | 5790848 - 5791972 | 41637.5 |
| dna helicase | PviCFBP13507_26290 | Not Available | Positive | 5791983 - 5796221 | 154504.0 |
| hypothetical protein | PviCFBP13507_26295 | Not Available | Negative | 5796523 - 5796714 | 7760.02 |
| pbs lyase | PviCFBP13507_26300 | Not Available | Negative | 5796927 - 5798279 | 50575.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
