Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | CFBP13507 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181068 bp
Thymine Count
1214519 bp
Guanine Count
1761031 bp
Cytosine Count
1725290 bp
Genome Length
5881917 bp
Protein-coding Genes
5114 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PviCFBP13507_26205 | Not Available | Negative | 5770509 - 5771432 | 33697.5 |
| 3-phosphoglycerate kinase | PviCFBP13507_26210 | Not Available | Positive | 5771530 - 5771814 | 10381.5 |
| fmn-dependent nadh-azoreductase | PviCFBP13507_26215 | Not Available | Positive | 5771955 - 5772554 | 21831.1 |
| oxidoreductase | PviCFBP13507_26220 | Not Available | Negative | 5772582 - 5773316 | 25903.0 |
| duf1349 domain-containing protein | PviCFBP13507_26225 | Not Available | Positive | 5773429 - 5774001 | 21046.1 |
| rna--nad 2'-phosphotransferase | PviCFBP13507_26230 | Not Available | Negative | 5774048 - 5774611 | 21035.7 |
| hypothetical protein | PviCFBP13507_26235 | Not Available | Negative | 5774674 - 5774982 | 11688.7 |
| hypothetical protein | PviCFBP13507_26240 | Not Available | Negative | 5774996 - 5775235 | 8993.63 |
| shlb family hemolysin secretion/activation protein | PviCFBP13507_26245 | Not Available | Positive | 5775609 - 5777189 | 58850.6 |
| filamentous hemagglutinin | PviCFBP13507_26250 | Not Available | Positive | 5777213 - 5783125 | 203063.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |
